CDS

Accession Number TCMCG006C119988
gbkey CDS
Protein Id XP_013643271.1
Location join(46988345..46988383,46988968..46989101,46989181..46989265,46989518..46989571,46989651..46989742,46989863..46989966,46990045..46990964,46991393..46991558,46991629..46992003,46992078..46992327,46992404..46992527,46992602..46992660,46992790..46992837,46992914..46993073)
Gene LOC106348145
GeneID 106348145
Organism Brassica napus

Protein

Length 869aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013787817.2
Definition syntaxin-binding protein 5 isoform X3 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category U
Description WD40 repeats
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08518        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0002791        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005096        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017075        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0017157        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0030141        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030695        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045921        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050708        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051046        [VIEW IN EMBL-EBI]
GO:0051047        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0060589        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0099503        [VIEW IN EMBL-EBI]
GO:1903530        [VIEW IN EMBL-EBI]
GO:1903532        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCGTGAAGAAGCTGGTCGAGAAAGCAGGGAAGAAGCCTGGAGGAAGCCCATCGGAAGGGCTGAGAGCTAATGACGTTGAGCCACGTGTCGTGTTACACTATGGAATTCCATCAGGAGCTCACTTGTTTGCTTATGATCCGGTTCAGAAGATTCTCGCTGTTTCCACCAAGGATGGTAGAATCAAGTTGTTCGGGAAAAATCAGACTCAGGCATTACTAGTGTCAGAAGAAGCATCCACAAGCAAGTTTATTGAGTTTGTTCAGAACCAAGGACTTCTTCTCAATGTGAATTCCAAAAACCAGATTGAAGTTTGGGACTTGGAGAAGAAGCTTATGTCTCATGTTCATGTATTCAACGGCGAGATCACATCTCTCAGGGTTATGCAACATACACCTTACTTTTATGTTGGAGACTCTTCTGGTAATGTATCAGTGTTGAAGATCGATCAAGACTCTAATCAAGTGATACAAATGGATTACACTATACCTTATCTAGCATCAAATGGCTCTCCAGTTGAAGCTTCTGATGATACTTCAGTTGTGAGCATTCTACCACAGCCAACAGCTGAAACCAAAAGGATTCTACTGGTGTTTAGTAGCGGGTTTATCACATTATGGGACATCAAAGAAAGCAAACCGGTTCTCAAAACAGGAGGAAACGGTATGGTAAAGCAAGAAGCAAAGAAAGCCACTTGTGCTTGTTGGGTTTGCCCTTCAGGAAGCAAAGTAGCAGTTGGATATAGCAATGGAGACATTCTAATATGGAGCATGACAGAGAGTTTTTCCATGGTTTGCAAGCTTAACCTCGGATACAAAGCCGAGAAGACACCGATAAATTCTCTAAAATGGGTCTACGCTGAAGGGAAAGCAAGCAGAGTTTACGCCACTGGATCATCCTCAAACTCCTTGCAAGTGGTTTTACTTAACGACCAAACCGAAGTTAAGATGGTTAAGCTGGGGCTTCATGTCTCTGAGCCTTGTGTTGGCATGGAGATGATCATGGCTGATGCTAAACAAGATTCTCTCCTTGTTCTTGGAAAGTCTGGACGTGTGTATGCCTACGATGATTATATGATTGAGAAGTATCTAATTCAATCTCAGTCCAAGTCACCTCCTTCTCTCCCTAAGGAGAGTGTGGTCAAGCTGGCGTTTTCAGATTCTTGCAGTGGTGTTACAGTGGGAAAGTTTCTTACAAACTCTTCACACTTGCTGAATCTCTCTGACGAGGATTATGCTCAGCTGGCGAAATATACTGCGCCGTTTCTTCCTTCTCAGATAGTTTCAAAGGAAGCTTCTCGTTCTGCTCATTTTCCTGGTTTCACCAAAGTTAAGAATGTTTACATCACGGGACATAGTGATGGAAGCATTGGTGTATGGGACATGTCCTGTCCTTTTCTCGTTCCTGTCTTGTTCCTGAAAGAACAGCAGGCTGATCAAGATATATCATCACGTGGAACTGCTGCATTAACAGCTTTGCATTTCGACAGCAACTCAAGGCTTCTTGTCTCTGGTGATCAGAACGGAATGGTTCGCCTTTATAGGTTCAAACCTGAGCCATACCTAACAGAAAACAGTTTCATCCCTTTCCAAGGAAGCTCAAAGAAAGGGAATAACCATATTGTTCATAGTGTCAAGCACATAAAGCTCACTGGCTCCATAACATGTATTCAGAAAAGCCAAAACTCAAAACATCTCGCTATCGGATCAGATCAAGGACATGTTTCTCTGGTTGACGTTGAGGAAGCAACTGTGTTATATACAAAACACATTGCTAGTGATATCTGTCCAGGGATCACCTCCTTGCAGTTTGAGAGCTGCAGTGTGCAAGGCTTCGAGAAGAACGTGTTGGTGGTTGCTATGAGGGACTCGTCTGTTTTTTCTTTGGATAGTGACACAGGGAACATGATTGGAACCAACATGGTTAAGCCTAAAAAGCCATTCAAGGCTCTGTTCATGCAGATTCTAGATGGAAAACAAGACTCTTCAGGAAATGGAGAGAGCATAGTTGAGGATGTTTCGACAAGGCAGCCTTCGGTTTTGCTTTGTTCTGAGAAAGCTATATACATCTACCCATTGTCTCAAGTTGTCCAGGGAGTGAAGAAGGTTCTTCACAAGAAAAAGTTTAGTTCTCCATCCATTTGCTCAGCTTCTACCTTCTATGGAACCTCTGGTGTTGGCCTTATACTTGTCTTCTCTGATGGAACTGTTGAGATAAGGTCTTTGCCAGAACTATCTCTACTAAAACAAATTTCCATTAGAGGCTTCACGTACTCTTCACCAAAGCAAAACTCATTACCAGAGATTACCATATCTGCTTCATGGGATGGAGATCTAGTCATGGTGAATGGAGACGATGAACTTATTGTCAGCTCAGTGTTACCTCAGAAGGAAACATTTAGGATGGAACCACTGCATCGGCTGTTGCGTCATCTCCAAAGGAAAAGAAGGGTATGTTTGGTTCTGTCTTCAAGACTAAACCCAAGCGTGCAGCTGATACAGAAACAACAGAAAGCACCAAGGAAACTATTGAGGAGCTTTCTAAGATCTTCACCACAGCTAATTTCCCGTGGAACAACAATGTTGAGCGTAGTAGAGAGAGCAATGTAG
Protein:  
MFVKKLVEKAGKKPGGSPSEGLRANDVEPRVVLHYGIPSGAHLFAYDPVQKILAVSTKDGRIKLFGKNQTQALLVSEEASTSKFIEFVQNQGLLLNVNSKNQIEVWDLEKKLMSHVHVFNGEITSLRVMQHTPYFYVGDSSGNVSVLKIDQDSNQVIQMDYTIPYLASNGSPVEASDDTSVVSILPQPTAETKRILLVFSSGFITLWDIKESKPVLKTGGNGMVKQEAKKATCACWVCPSGSKVAVGYSNGDILIWSMTESFSMVCKLNLGYKAEKTPINSLKWVYAEGKASRVYATGSSSNSLQVVLLNDQTEVKMVKLGLHVSEPCVGMEMIMADAKQDSLLVLGKSGRVYAYDDYMIEKYLIQSQSKSPPSLPKESVVKLAFSDSCSGVTVGKFLTNSSHLLNLSDEDYAQLAKYTAPFLPSQIVSKEASRSAHFPGFTKVKNVYITGHSDGSIGVWDMSCPFLVPVLFLKEQQADQDISSRGTAALTALHFDSNSRLLVSGDQNGMVRLYRFKPEPYLTENSFIPFQGSSKKGNNHIVHSVKHIKLTGSITCIQKSQNSKHLAIGSDQGHVSLVDVEEATVLYTKHIASDICPGITSLQFESCSVQGFEKNVLVVAMRDSSVFSLDSDTGNMIGTNMVKPKKPFKALFMQILDGKQDSSGNGESIVEDVSTRQPSVLLCSEKAIYIYPLSQVVQGVKKVLHKKKFSSPSICSASTFYGTSGVGLILVFSDGTVEIRSLPELSLLKQISIRGFTYSSPKQNSLPEITISASWDGDLVMVNGDDELIVSSVLPQKETFRMEPLHRLLRHLQRKRRVCLVLSSRLNPSVQLIQKQQKAPRKLLRSFLRSSPQLISRGTTMLSVVERAM